merry christmas to all...and to all a good night!

just doing the day-before-we-leave things like:

making an address list for cards
running an electrophoresis gel
printing out christmas songs for the ukulele
refilling the mp3 player
making a stab at text on my research poster for january's pag (plant & animal genome) conference in san diego

ya know, stuff like that.
  • navydoc
    When will you be in San Diego?
    by navydoc at 12/28/09 9:26AM
  • justcallmejoe
    this is an old post
    by justcallmejoe at 04/09/10 12:23PM

it's fun having nerdy relatives

my scientist auntie (Rachel) sent me a birthday email this morning with a lovely encoded message:

"Have a CAC GCG CCC CCC UAC day !!!!!!"

can you figure out what she's saying? hint: see if you can get your code on and solve the mystery...


UPDATE:
looks like the firestorm of responses must be answered! so, my auntie was using the nucleotide (the bases from which our DNA is made, A, C, G, T) triplets that code for the 20 amino acids found in our bodies. these triplets are translated into amino acid chains that then are jumbled together to make the proteins that make our bodies work. various combinations of DNA bases code for amino acids. the first triplet (called a codon) in my auntie's message, CAC, tells the body's protein-making machinery to grab the amino acid histidine whose one-letter abbreviation is H. the GCG codon is a signal for alanine, A and so on. the complete "protein" message aunt rachel made was: histidine-alanine-proline-proline-tyrosine which, using the one-letter abbreviations, spells H-A-P-P-Y. good job, jay, for guessing correctly.

if you're intrigued, check out a codon table.

p.s. a note on the U in the message from my aunt: DNA is first copied into a message (transcript) called RNA before being translated into the protein. the T (thymine) in DNA gets changed to a U (uracil) in RNA.
  • megan
    I'm having flashbacks to science class but I can't figure out exactly where?!
    by megan at 11/11/09 9:06PM
  • shadow
    looks like it could mean "happy"
    by shadow at 11/12/09 7:56AM
  • shadow
    but im not having a lot of luck finding a nucleotide - alphabet cross-reference that helps with this. barking up the wrong tree perhaps
    by shadow at 11/12/09 8:02AM
  • lilsis
    Happy birthday!!!
    by lilsis at 11/12/09 8:24AM
  • shadow
    what do i win?
    by shadow at 11/17/09 5:19PM
  • bruke
    I really enjoyed taking genetics classes at USF, but then dropped out of the bio dept. and changed my major. Now I'm coding in Dewey.
    by bruke at 12/16/09 1:56PM

School Bells Are a Ringin'

Ah, the beginning of a new semester. My developmental biology textbook has already given me reason to chuckle. Like my biochemistry book of past entry fame, the eighth edition of Gilbert's Developmental Biology book tries (and succeeds) to make the subject exciting with lots of fun anecdotes and silly things in the footnotes. Being a nerd, I appreciate these efforts.

Also like the biochem book, each new chapter features quotes from all parts of culture that somehow correspond with the new topic at hand. The quotes combo from chapter two, however, was much too silly.

Chapter 2: Life Cycles and the Evolution of Developmental Patterns

"The view taken here is that the life cycle is the central unit in biology...Evolution then becomes the alternation of life cycles through time, genetics the inheritance mechanisms between cycles, and development all the changes in structure that take place during one life cycle" JT Bonner (1965)

(Pretty much what you'd expect, a quote from a scientist...then this followed:)

"It's the circle of life
And it moves us all"
Tim Rice (1994)


Rice's work has helped me to understand life cycles: the birth of a new lion king, the estrangement of said lion due to extreme guilt, the romance between the lion and his childhood sweetheart and then later the reconciliation of the lion king to his kingdom after numerous trials. Thanks, Tim.



  • shadow
    dont forget new lions with said childhood sweetheart once they grow up and he realizes shes a hottie. complete the cycle!
    by shadow at 08/27/09 4:19PM
  • megan
    Simba, Mufasa, Nala...who knew they'd teach us so much?? Lion King is my fav Disney movie.
    by megan at 08/27/09 4:33PM
  • kennon
    by kennon at 08/28/09 1:40AM
  • jenilikesjuice
    hahah, that's wonderful.
    by jenilikesjuice at 08/29/09 10:34AM

david, the ethnically plastic wonder

i coined the phrase "ethnically plastic" to describe david's features since he can mold, with slight modifications, into a handful of ethnicities. sure, white male is usually what describes him but he's been known to pull off a mean Prince impersonation (couple hours with a flat iron plus pencil thin facial hair did the trick). if you've seen his driver's license his mexican look is solid. a future photo project is to recreate late 1800s Japanese samurai folk art using david as the samurai (complete with his flaring nostril and 45 degree angle eyebrow warrior pose).

so you can imagine how proud i felt today in my office when, for the second time now, david has been described as looking indian. not native american indian. but india indian. the first indian identification credit david received was from my indian officemate who even thinks the way david talks is somewhat indian in tone. i added two pics to the bulletin board above my desk the other day. my other, newer indian officemate took one look and said david looks indian.

"he has dark hair...and that moustache..." my officemate said as he preened his 'stache.

"he looks northern indian not southern indian," he added.



chaats off to you, honey.

  • TheMrsCrabtree
    hahah that's great! i miss you guys...hope you're doing well!
    by TheMrsCrabtree at 07/09/09 3:25PM
  • navydoc
    In my xray class I was recently in, there was a Puerto Rican that greatly resembled David. I liked talking with him, cuz it was like I was talking to David.
    by navydoc at 07/10/09 12:59AM
  • lilsis
    HAHA!!! Awesome.
    by lilsis at 07/10/09 9:30AM
  • kennon
    this is totally true: every time i see dave, i think "mmmmm, chapati"
    by kennon at 07/10/09 9:05PM
  • marla
    Don't forget Middle Eastern terrorist on his passport...

    It was a pleasure to see the both of you yesterday :)
    by marla at 07/12/09 4:12PM
  • campgal
    whichever ethnicity he is that day...he is always very good looking:)
    by campgal at 07/20/09 9:26AM
  • bruke
    Who would have thought that one man could be so diverse?
    by bruke at 07/24/09 11:23AM
  • tu_madre
    good seeing ya today (-:
    by tu_madre at 07/27/09 6:32PM

new things!

- blooming African violet bud in my office
- charged MP3 player
- electrophoretic gel (hopefully with good results from this afternoon's PCR)

- PLEONAST v3.0, of course!

I wear my pleonast t-shirt in honor of you today.
  • dave
    what about your new refrigerator at the apt?
    by dave at 07/01/09 3:17PM
  • wife_of_burt
    sounds like you have everything you need now! ;) I mean a blooming African violet, a charged MP3 player and whatever that last thing is....what more could a girl ask for!?! Hope you're doing well.
    by wife_of_burt at 07/01/09 3:24PM
  • megan
    will you be in TN next weekend mon amie?
    by megan at 07/01/09 3:56PM
  • jenn
    posted the tostada recipe on my blog yesterday! :) We had them last night and they were SO good.
    by jenn at 07/07/09 10:16AM